Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 2K1A Chain:A ((974-997)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGGLLLLTILVLAMW------KVGFFKRNR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9466 for 96 contacts (-98.6/contact) +
2D Compatibility (PS) -2288 + (NN) 555 + (LL) 11520
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -1929.0 ( -20.09 by residue)
QMean score : 0.268
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