Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKEVTPEMLNYNKYPGPQFIHFENIVKSDDIEFQLVINEKSAFDVTVFGQRFSEILLKYDFIVGDWGNEQLRLRGFYKDASTIRKNSRISRLEDYIKEYCNFGCAYFVLENPNPRDIKFDDERPHKRRKSRSKSQSSKSQTRNNRSQSNANAHFTSKKRKDTKRRQERHIKEEQDKEMTSAKQHFVIRKKK |
1TV8 Chain:A ((13-36)) | -----------------------------------------------------------------------------------------IRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3829 for 65 contacts (-58.9/contact) +
2D Compatibility (PS) -2315 + (NN) 212 + (LL) 6020
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -2662.0 ( -40.95 by residue)
QMean score : 0.002
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