Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYRE--IDEATG-----IYFQEIY----EHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWH-SMWFNHRG-RSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
| 2W4M Chain:A ((28-250)) | -VRAVFFDLDNTLIDTAGASRRGM------LEVIKLLQSKYHYKEEAEIICDKVQV-KLSKECFHPYNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDA--VVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKNGIVPLKSSPVPHYMVSSVLELPALLQSIDCKV--------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81841 for 1622 contacts (-50.5/contact) +
2D Compatibility (PS) -23036 + (NN) -10402 + (LL) 4960
1D Compatibility (HY) -16000 + (ID) 2750
Total energy: -129069.0 ( -79.57 by residue)
QMean score : 0.309
|
|
|