Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNK-TMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDG-------RLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 1WDI Chain:A ((3-345)) | -GLEAYDYHLPPEQIAQEGVEPRDMARLMVVYREGPFRVAHKRVRDLPEFLRPGDVLVFNESKVIPARLLARKP-TGGKVEILLVRER------ALLGPARKAPPGTRLLLLSPKDLAPVPGLQAEVVAVEED------------LVAHLEEVGEVP--------------------------AAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRP----------MHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYRE-GVGVVAGEGETRLFIRPPYTFKVVDALFTNFHLPRSTLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163021 for 2209 contacts (-73.8/contact) +
2D Compatibility (PS) -30321 + (NN) -4214 + (LL) 2916
1D Compatibility (HY) -26400 + (ID) 6800
Total energy: -227840.0 ( -103.14 by residue)
QMean score : 0.471
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