Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITTLILASSLLLVATTSVKADDNFEMPTRYVKMSEKSKAFYQRLQEKQRKAHTTVKTFNNSEIRHQLPLKQEKARNDIYNLGILISQESKGFIQRIDNAYSLENVSDIVNEAQALYKRNYDLFEKIKSTRDKVQVLLASHQDNTDLKNFYAELDDMYEHVYLNESRVEAINRNIQKYN |
4MWH Chain:A ((138-180)) | ----------------------------------------------------------------------------------------------------------------------------LFDIIKDPISKTPALVFEYVDNVDFRILYPKLTDLEIRFYMFELLKALDYCHSMGIM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6423 for 170 contacts (-37.8/contact) +
2D Compatibility (PS) -4584 + (NN) -2590 + (LL) 9848
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -8449.0 ( -49.70 by residue)
QMean score : 0.366
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