Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGSLSEIKDKILSTEKTSKITSAMQMVSSAKLVKSEQAARDFQVYASKIRQITTNLLKSDLVSGSDNPMLASRPVKKTGYIVITSDKGLVGGYNSKILKAMMDTITDYHTENDDYAIISIGSVGSDFFKARGMNVSFELRGLEDQPSFDQVGKIIAQAVEMYKNELFDELYVCYNHHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELEPNREVILEQLLPQYTE--SLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE
1COW Chain:G ((1-272))--ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY-------------------------------------------LCGAIHSSVAKQMK-------------------------------------------------------------------------------------------------------------------------------LANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL-


General information:
TITO was launched using:
RESULT:

Template: 1COW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8573 for 700 contacts (12.2/contact) +
2D Compatibility (PS) -13050 + (NN) -2472 + (LL) 11716
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -7633.0 ( -10.90 by residue)
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_1COW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1COW-query.scw
PDB file : Tito_Scwrl_1COW.pdb: