Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSLSEIKDKILSTEKTSKITSAMQMVSSAKLVKSEQAARDFQVYASKIRQITTNLLKSDLVSGSDNPMLASRPVKKTGYIVITSDKGLVGGYNSKILKAMMDTITDYHTENDDYAIISIGSVGSDFFKARGMNVSFELRGLEDQPSFDQVGKIIAQAVEMYKNELFDELYVCYNHHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELEPNREVILEQLLPQYTE--SLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE |
1COW Chain:G ((1-272)) | --ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY-------------------------------------------LCGAIHSSVAKQMK-------------------------------------------------------------------------------------------------------------------------------LANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1COW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8573 for 700 contacts (12.2/contact) +
2D Compatibility (PS) -13050 + (NN) -2472 + (LL) 11716
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -7633.0 ( -10.90 by residue)
QMean score : 0.409
|
|
|