Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVEHFVTKFVPENYNLFLDINRQTKTFSGNVAVSGEALDNNISFHQKGLTIKSVLLDNQPLDFQLDEDNEAMHIQLHETGSMVLVFEFSGHITDNMTGMYPSYYTVNGIKKEVISTQFESHFAREVFPSIDEPEAKATFDLSLKFDQKEGEIALSNMPEINAEQR-QETGLWT---FDTTPKMSSYLLAFALGELHGKTTHTKNGTLVGSYA-----TKAHQLNELDFSLDIVVRVIEFYEDYFGVRYPIPQSLHVALPDFSAGAMENWGLVTYREVYLLVD-ENSSVSSRQQVALVVAHEIAHQWFGNLVTMKWWDDLWLNESFANMMEYVSIDYIEPKLNIFEDFQTGGLPLALKRDATDGVQSVHV------EVNHPDEINTLFDPAIVYAKGSRLMHMLRRWLGDTDFAAGLKIYFEKHQYQNTIGRDLWNAL-----SQTSGK---DVAAFMDSWLEQPGYPVMAAKIEEDELILTQKQFFIGEHEDKSR------LWQIPLNSNWEGIPEILTEETVVIPNFSQLAE---KNKENGALRFNTENTAHYITNY---QGQLLEH-IISDLPLMDNISKLQIVQERHLLAESGMISYSSLIPLVSLLSQETSYLVNSAIKSVIDGLSLFVQEDSQDEFDFKEFVNKLSAFNFNRLGFEKREGEGDDSEMVRHLSLSLALYSDNEHAIEEAHHIFKA--------HENNIAAIPAAIRLLVLTNEMKH-------FESKELSHLLLETYSTTTDGNFKRQLASALSHTTDSKTLKKLLSDWKNKDIVKPQDLAMSWYATFLKNSFTQQSVWEWAQENWEWI-KATLGGDMSFDKFVIYPSSSFKTEERLEQYKNFFEPQLSDMAI---SRNISMGIKEISARVLLITKQKEEVINTIKKYI |
| 4NZ8 Chain:A ((113-894)) | ----------------------------------------------------------------------------------------EFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLI--HPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGM----YALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVM---AVDALASSHPLTTPAEEVNTPAQISEMFD-SISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGV----MQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMF-DRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLAKTLFDQWMSDPENN--PIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLV--------NEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQD-ATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNM-DVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIEHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221055 for 5991 contacts (-36.9/contact) +
2D Compatibility (PS) -76530 + (NN) -23351 + (LL) 7604
1D Compatibility (HY) -51200 + (ID) 11750
Total energy: -376282.0 ( -62.81 by residue)
QMean score : 0.384
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