Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLIEPIRNGKRITDGAIALAMQVYILQNVFLDDDILFPYYCDPKVEIGKFQNAVIETNQEYLKEHDIPVVRRDTGGGAVYVDSGAVNICYLMK--DHGQFGDFKRAYEPAIKALKTLGAS---------SVEMRGRNDLIIDGKKVSGAAMTIVNGRIYGGYSLLLDVDFDAMEKVLNPNRKKIESKGIKSVRSRVGDIRSHLSEDYRHITTDQFKDLMV---CQLLHIDHIDQAKRYHLTEKDWAAIDALADEKYKNWDWNYGNSPQYSYHRDARFPSGTYDFHLEIEKGIITNCRIYGDFFSSKDISDIENLLIGCPMKEELVLEKLSTVSLEDYFGQTSPEEIKAVLFP |
3R07 Chain:A ((55-278)) | --------------------------------DKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPV--------GEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANV-----TDFVDVSIDEVRNALIRGFSETLHIDFREDT----ITEKEESLARELFDKKYSTEEWNMGLLRKEVV--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58895 for 1424 contacts (-41.4/contact) +
2D Compatibility (PS) -22053 + (NN) -6274 + (LL) 8520
1D Compatibility (HY) -8800 + (ID) 3400
Total energy: -90902.0 ( -63.84 by residue)
QMean score : 0.432
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