Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNS---------LIVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK
1T4W Chain:A ((154-185))
-----------------------------------CLAVFLDDENGNEILHAYIKQVRIVAYPRRDWKNFCEREDAKQ-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T4W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 600 for 65 contacts (9.2/contact) +
2D Compatibility (PS) -2679 + (NN) -2185 + (LL) 4532
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -1732.0 ( -26.65 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_1T4W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T4W-query.scw
PDB file :
Tito_Scwrl_1T4W.pdb
: