Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRVYSFLGGIILVILILFGLTTYLEKKSSSTPNSDKLVIYNWG---DYIDPALLKKFTKETGIEVQYETFDSNEAMHTKIKQG-GTTYDIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIMLVD----SAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIV--ADEMKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEPKNAAQNAEYIGYATPNLKAKALLPADIKNDKAFYPPDKTIDHLEVYNNLGQKWLGIYNDLYLQFKMYRK |
| 4EDP Chain:A ((36-309)) | ------------------------------------KLVVSTWGLNEDVLKETVFEPFAKEHGVEIVLDIGNNSERL-TKMKNNPNSQIDITYLAESFAEQGVEAGIFDKLDYSKIPNASEMNEKAKSTV---EAGYGPAYTLNSIGIVV-DPSAGIEINSWEDLWKPELKNKIAIPDITTTNGPAMVEIAAEKAGVDVKTDN---GEAAFKELEALKPNVVKTYSKSSDLANMFSNGEIVAAVASDFAFGTISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEVQEKTAKALNESPVNKEVKLSEEETKNLTYGPVVDNAKVIDFKFVNSVMDQWVNNWNRIMN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133407 for 2121 contacts (-62.9/contact) +
2D Compatibility (PS) -28545 + (NN) -14260 + (LL) 3336
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -189676.0 ( -89.43 by residue)
QMean score : 0.489
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