Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
2W5E Chain:A ((135-162))
--------YCRVLAVHQTNTGYTGGAVIIDPTDFHP----------------------
General information:
TITO was launched using:
RESULT:
Template:
2W5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6140 for 99 contacts (-62.0/contact) +
2D Compatibility (PS) -2626 + (NN) 1939 + (LL) 3256
1D Compatibility (HY) -800 + (ID) 400
Total energy: -4771.0 ( -48.19 by residue)
QMean score : -0.111
(partial model without unconserved sides chains):
PDB file :
Tito_2W5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W5E-query.scw
PDB file :
Tito_Scwrl_2W5E.pdb
: