Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------MLSRQNSKLIQAFIAIILFFSLGLVIKYWPDTVIAFDQNI----QESVRGQLPNLSTRFFKLITVI-GNTVSQIAIAIM-----SVTFCYLKKWYPQARFIAVNAIISGICILSLKLIFQRVRPTLTHLVFAGGYSFPSGHSMGTFMIFGSIIILLQYYMPKSIWKLLCQGILGLLIFLIGLSRIYLGVHFP--TDVLAGFILAYGILNLTAYIFLAKDWLKKVK |
| 4B46 Chain:A ((1-367)) | MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTEPVYGLGILPGSDEGGIYTLNAARSFQTFVREV----DNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTLAGGGVSTVGYASEGVTAHTTNRITSLVRKAALGRLTLPCEIEGAERALLVLAG--------------------------PPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAIEAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225623 for 1407 contacts (-160.4/contact) +
2D Compatibility (PS) -19497 + (NN) -4055 + (LL) 1704
1D Compatibility (HY) 0 + (ID) 1650
Total energy: -249121.0 ( -177.06 by residue)
QMean score : 0.290
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