Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKTKSFFGHPRGLSTLFFTEMWERFSYYGMRAILLYYMYYSVSQGGLGMDKTVAASIMAVYGSLVYLSSVIGGFVSDRILGSRKTVLYGGILIMLGHIALATPFGQTA-LFISIALIILGTGLLKPNVSEMVGNLYGENDSRRDAGFSIFVFGINLGA----FISPIVVGYL----GQEVNFHLGFSLAAIGMFFGLLQYTLDGK---KYLTEESLRPNDPLSPEEKSSLYKKVGLILIGIVIVLILLHLMHMLTIEVIIDIFSIIA-IAIPIIYFIKILSSKKISSVERSRVWAYIPLFIASILFWSIEEQGSVVLALFADEQTKLYLNFFGHHI-NFPSSYFQSMNPLFIMLYVPFFAW--LWAKWGSKQPSSPKKFAYGLFFAGASFLWMMLPGLLFGVNAKVSPLWLTMSWAIVIVGEMLISPVGLSATSKLAPKAFQAQMMSIWFLSNAAAQAINAQIVKLYTPDTQILYYGVVGGITVVFGFILLFYVPRIEKLMSGVK |
| 4LEP Chain:A ((9-437)) | -SKTHSFM-------TVSLIELWERFGYYGMQALIVYFMVQR-----LGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMHKSLANYG-------VN------KKSLAIVLALAALSVVASAIILEY------EDVARVFVYAAGVAVLGIFFHLIR---P---SERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDF-------WTWSPAQFQALNPIWIMVLSPVLAWSYSW------DFSIAAKFALGFAVVAIGFFIYGFAG-QFAVNGKTSSWVMIWGYASYSLGELLVSGLGLAMIARY------GFMMGAYFVASGISQYLGGVVANFASVPQDLVDPLQTLPVYTNLFNKLGVAAVVCTIIALAVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -349286 for 3145 contacts (-111.1/contact) +
2D Compatibility (PS) -39346 + (NN) -9550 + (LL) 2620
1D Compatibility (HY) -44000 + (ID) 6350
Total energy: -445912.0 ( -141.78 by residue)
QMean score : 0.387
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