Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVF-SLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVML-----VIAIIQGLAIAISFQYHNGFSLTKLLLATMILVT---GAYIISWIGNLNAEYGFG---------GMTILVVVGMLVGQFNNIPLIFELFQDGYQLAIILFLLWTLVAMYLMITFERSEYRIPVMRTSIHN-------RLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSY--NDYFSLSSIQG----VVIYMILMLVLSVAFTF-----VNIDPTKISEAMRESGDFIPNYRPGKET-----QSYLSKICYLFGTFSGF------FMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 1RHZ Chain:A ((59-409)) | ----------------------------------------------------WQTITA---SRIGTLITLGIGPIVTAGIIMQLLV----GSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPV-ILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGG-------GTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195051 for 2126 contacts (-91.7/contact) +
2D Compatibility (PS) -31487 + (NN) -13525 + (LL) 7164
1D Compatibility (HY) -29600 + (ID) 3900
Total energy: -266399.0 ( -125.31 by residue)
QMean score : 0.140
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