Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MNKRILNSQFAVYKNWPSWLLLLFACFMVYLFFFVGLTLGGVGIVLVSSVLYKFSSYTFFEFINLFNNIYGELGTFSFSAFLLLIWVKFVEKRPFSE----------LGFSTKFKRTL--WSLIKGWSIGFILFSIS-------VITAYILGGLDFHSYDVSKATIFYVVTLLPFWLIQSGTEELLTRG---WLLPLINHR---------FHLAVAIGVSSTLFGILHL---VNAHVTFLSIVSIICSGV--------LMSLYMIKSG-NIWSVAALHGAWNFSQGNLYGIAVSGQKAGASLLHFTVKENAPDWISGGAFGIEGSLISIFVLLAAIIYLLWLIKTEETD |
| 4XB6 Chain:C ((1-353)) | MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLD--TTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLA-----HADNVEVAGFVSHLKLPH-YVDFQAELELLKRLQQEQNH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201099 for 1981 contacts (-101.5/contact) +
2D Compatibility (PS) -30862 + (NN) -3549 + (LL) 916
1D Compatibility (HY) 4800 + (ID) 2650
Total energy: -232444.0 ( -117.34 by residue)
QMean score : 0.120
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