Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MIYKIIAS-----LFLVLIPIFSQVLVKIFKLKKFNIMFPDVAFPIFVFLIPLISSSLLKQNLLPYYLILISLLAIGITI--KLLRTKTLFSYKRFLKLFWRSGFILTFLFYLGLLVIIFIKVQ
1MZK Chain:A ((177-298))
LGSSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTK-------FKWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNE
General information:
TITO was launched using:
RESULT:
Template:
1MZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -208442 for 847 contacts (-246.1/contact) +
2D Compatibility (PS) -11854 + (NN) 1371 + (LL) 808
1D Compatibility (HY) 4000 + (ID) 900
Total energy: -215017.0 ( -253.86 by residue)
QMean score : 0.044
(partial model without unconserved sides chains):
PDB file :
Tito_1MZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZK-query.scw
PDB file :
Tito_Scwrl_1MZK.pdb
: