Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISEEEVRHVANLSKLRFSDQETKEFASSLSKIVDMIELLNEVDTEGVPVTTTMADRKTVMREDIAQPGNNRDDLFKNVPQHQDYYIKVPAILEDGGDA
3KFU Chain:G ((5-90))
-ELSPELLRKLETLAKIRLSPEEEALLLQDLKRILDFVDALPRVEEGGA------EEALGRLREDEPRPSLPQAEALALAPEAEDGFFRVPPV-------
General information:
TITO was launched using:
RESULT:
Template:
3KFU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3815 for 356 contacts (-10.7/contact) +
2D Compatibility (PS) -9318 + (NN) -4409 + (LL) 552
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -23290.0 ( -65.42 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3KFU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KFU-query.scw
PDB file :
Tito_Scwrl_3KFU.pdb
: