Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMS------DLEGKQAEEVVGTALDLGINFFDHADIYGGGLSELRFRDAIKHLNVNRDKMIIQSKCGIREG----YFDFSKEYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLDEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLFVNHPDYKE---LNE-----------------TIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
| 1PYF Chain:A ((6-301)) | ----LGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFN--REDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSN---FSLEQLKEANKDGL-VDVLQGE------------YNLLNR---EAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFAPG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157768 for 2177 contacts (-72.5/contact) +
2D Compatibility (PS) -28220 + (NN) -8454 + (LL) 1680
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -213212.0 ( -97.94 by residue)
QMean score : 0.427
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