Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNN----KHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAF-TSSKNYQNYLKN-------EKNQFKQTITLEEKAENKYLAVAVSSIIA---RNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAY--GISSLEHCAKLHFANTKKAQALLK |
| 1EKE Chain:A ((3-217)) | ----------------------------------------------------------------------------------IIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVK---ELTKNKRAYLKKLLENLGYVEKRILEAEEINQLMNSINLNDIEINAFS-KVAKNLIEKLNIRDDEIE---IYIDACSTNTKKFEDSFKDKIEDIIKERN-LNIKIIAEHKADAKYPVVSAASIIAKAERDEIIDYYKKIYGDI------GSGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRILDKSK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77477 for 1486 contacts (-52.1/contact) +
2D Compatibility (PS) -20950 + (NN) -9211 + (LL) 5784
1D Compatibility (HY) -12000 + (ID) 3350
Total energy: -117204.0 ( -78.87 by residue)
QMean score : 0.383
|
|
|