Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFTGLWIGFVTDALDTLGIGSFATTTTFFKLTKLVEDDRKIPATMTAAHVLPVLLQSLCFIFVVKVEALTLITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTLLITAAIIMLYRMITNPGAGISDSVHGLHGIWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLVTGGILGVIVAVLFLTNLDLNSLKTLVVGIVLFTGAMLIRSSFKKTMPKSHH |
3D9S Chain:A ((80-106)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8257 for 97 contacts (-85.1/contact) +
2D Compatibility (PS) -2504 + (NN) 1577 + (LL) 21492
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 10508.0 ( 108.33 by residue)
QMean score : -0.127
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