Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEITWTVKYITEFIATAFLIILGNGAVAN---------VDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL
2D57 Chain:A ((41-253))------------EFLAMLIFVLLSVGSTINWGGSENPLPVDM----------VLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTA----------------GHGLLVELIITFQLVFTIFA---------------------SCDSKRTD--VTGSVALA---IGFSVAIGHLFAINYTGASMNPARSFGPAV--------IMGN------WENHWIYWVGPIIGAVLAGALYEYVFC


General information:
TITO was launched using:
RESULT:

Template: 2D57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167615 for 1852 contacts (-90.5/contact) +
2D Compatibility (PS) -21161 + (NN) -6005 + (LL) 4480
1D Compatibility (HY) -21600 + (ID) 3550
Total energy: -215451.0 ( -116.33 by residue)
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_2D57.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D57-query.scw
PDB file : Tito_Scwrl_2D57.pdb: