Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKRYSKNSHNLITLLGIVVLASLISDFWSEVIATLLIIGGGYCAYYVYDKKRLKRFTSNQRIEALKSDIKETDQDIRHLEILKKDNRSKEYIKLAHQILPQLDLIRNEANQLQKAIEPNIYKRITKKANTFSNEINEQLIKLHASPELEPISDQEDEMIRIAPELKPFYHNIQDDHFAILKKIEEADNKAELAAIHQANMKRFTDVLAGYIRIKQSPKNFNNAKERLEQALQAIKKFNLDLDETLRQLNESDMKDFDVSLRMMQDERNSK |
| 1N5N Chain:A ((61-136)) | --------------------------------------------------------------------------------------------------------------------ATQVNVHKRIV--VMDLSEDKSEP--RVFINPEFEPLTEEMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQ--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15547 for 397 contacts (39.2/contact) +
2D Compatibility (PS) -7393 + (NN) 5286 + (LL) 12600
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 23090.0 ( 58.16 by residue)
QMean score : -0.048
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