Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVNALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPL-KPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWF-EKG-------FAEEWKRLETTLLE---VETPLLLMGDFNNPTGNQGYEL--------------------------VLNSPLALKDSHQIANHVF-GDHTIMADIDGWEGNKKALKVDHIFTSEDLS--ISSSQVVFEGGEAPVVSDHYGLEITMDF |
| 1AKO Chain:A ((1-267)) | -MKFVSFNINGLRA-----RPHQLEAIVEKHQPDVIGLQETKVHDDMFPL-------------------------EEVAKLGYNVFYH-------GQKGHYGVALLTKETPIAVRR-GFPGDDE---EAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWG--LVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93852 for 1857 contacts (-50.5/contact) +
2D Compatibility (PS) -24653 + (NN) -12633 + (LL) 2796
1D Compatibility (HY) -4800 + (ID) 2250
Total energy: -135392.0 ( -72.91 by residue)
QMean score : 0.412
|
|
|