Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRIWYLIIIITVILGGLAMKNLFATTEASSRKQEQDRVVKYIKQHV--ELTNGDQIKKVEFIDFQKNEMTGTWGISTKINEQFSISFSEDRIGGKLRALGYQPNEIGFSKDINSNNQNVNDIEVIYMKEE |
1P78 Chain:A ((13-71)) | ----------------------------KASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVAPP------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3501 for 231 contacts (15.2/contact) +
2D Compatibility (PS) -5938 + (NN) -322 + (LL) 4012
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -747.0 ( -3.23 by residue)
QMean score : 0.509
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