Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANR---IYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQ--EGIIDAELAH-SVILQESKKMKQLVDDIILLSKLDSN-LSDQKDEFSLNELLNSIIAYFKPLANKQKISITYRPDKHE--KLLKGNEELIQRAINNILSNALRYAVSHIEISYTNQK------LTISNDGPAISKEDLPYIFDRFYKGHGGQTGIGLAMTKEIIKQHHGNIIAESD-STSTTFTIYFNCHKIA |
| 4Q20 Chain:A ((26-252)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LADRSAALAEAERLKRDFVGNVSYELRTPLTTIIGYSELLERAD--SERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLL--LNAQERALKDAQLGGVTLAVECEEDVGLIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRDRGGPGLGLALVKALVELHGGWVALESEPGNGSTFT----CHLPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40725 for 1510 contacts (-27.0/contact) +
2D Compatibility (PS) -22694 + (NN) -8951 + (LL) 19732
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -67538.0 ( -44.73 by residue)
QMean score : 0.393
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