Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQNEGSYTLFVFLADQQALTDHAKDPQTIVESIGNVALDYLAVGLDPNKSTLFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGESIPAGFLVYPVAQAADITAFKANLVPVGTDQKPMIEQTREIVRSFNHAYNCQVLVEPEGIYPENDAAGRLPGL-DGNAKMSKSLNNG---IFLADDMDTVKKKVMSMYTDP----NHIKVEEPGQIEGNMVFHYLDVFGRDEDQKEITAMKEHYQKGGLGDVKTKRYLLDILERELSPIRERRLEYAKDMGQVYQMLQKGSEKAQAVAASTLDEVKSAMGLNYFK |
| 1MB2 Chain:A ((4-324)) | -----IFSGIQPSGVITIGNYIGALRQFVELQHE--YNCYFCIVDQHAITVW-QDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGK---EAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYG-ELFTIPEARIPK--VGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPG------ISNLLNIYSTLSGQS-IEELERQYEGKGYGVFKAD--LAQVVIETLRPIQERYHHWMES-EELDRVLDEGAEKANRVASEMVRKMEQAMGLGR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106953 for 2430 contacts (-44.0/contact) +
2D Compatibility (PS) -32994 + (NN) -9800 + (LL) 920
1D Compatibility (HY) -23600 + (ID) 5800
Total energy: -178227.0 ( -73.34 by residue)
QMean score : 0.478
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