Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIADQTFVKKVNQKLLLKEILKNSPISRAKLSEMTGLNKSTVSSQVNTLMKENLVFEIGQGQSSGGRRPVMLVFNKKAGYSIGIDVGVDYISGILTDLEGTIILDQHHHLESNSP-EITKDILIDMIHHFITRMPQSPYGLIGIGICVPGLIDKNQKIVFTP-NSNWRDIDLKSFIQEKFNVPVFIENEANAGAYGEKVFGAAKNHNNIIYASISTGIGIGVIINNHLYRGVSGFSGEMGHMTIDFNGPKCSCGNRGCWELYASEKALLKSLQTKEKKVSYQDIIDLAHLNDIGTLNALQNFGFYLGIGLTNILNTFNPQAIILRNSIIESHPMVLNSIRSEVSSRVYPQLGNSYELLPSSLGKNAPALGMSSIVIEHFLDIVKM
2HOE Chain:A ((22-377))-------------ISRILKRIMK-SPVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEKDSP----RPTKSLKISPNCAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWY--TKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRV-FNGNEYVFLEDVC-----NENVVLKHVLS----MGFS-LAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHALENYLERV--


General information:
TITO was launched using:
RESULT:

Template: 2HOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1833 -249337 -136.03 -714.43
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -136.03
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_2HOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HOE-query.scw
PDB file : Tito_Scwrl_2HOE.pdb: