Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPTKQHKKETFTHFIFRVFMILVGAASAAVSIELFLIPNDFIDGGIIGVSLILDHLFMSNPFLNFAFFVVILNIPFMIFGYKYIGKTFLVSTFIGIVGLAVIESSLHHVEAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFVMFINVFIFIWAVFVFGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVSEQ--YDEISDAILHRLGRGTTKL--KGKGGYTD--------------EEKDVIYAVVTRLEVTKLKSIVFEVDQ-----NAFITIMNTHETRGGKFKNAIH
3NCQ Chain:A ((3-101))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVR--------


General information:
TITO was launched using:
RESULT:

Template: 3NCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 218 6090 27.94 80.13
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.44

3D Compatibility (PKB) : 27.94
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.44
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_3NCQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NCQ-query.scw
PDB file : Tito_Scwrl_3NCQ.pdb: