Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLR----------SIG---PEPWKVAYVEPSRRP----ADG-RYGENPNR------------------LYQHHQFQVIIKPSPDNIQELYLD-----------SLRALGIDPLEHDIRF-VEDNWENPS-LGCAGLGWEVWLDG----------MEITQFTYFQQV----GG-LECKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE 1YFS Chain:A ((3-248)) LSAHEIRELFLSFFEKKGHTRVKSAPLVPEN---DPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDDEEAYRIWNEHIGIP-SERIWRLGEEDNFWQMGDVGPCGPSSEIYVDRGEEYEGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSNFEI----------------------------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 1YFS.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 675 7490 11.10 43.29 target 2D structure prediction score : 0.53 Monomeric hydrophicity matching model chain A : 0.61 3D Compatibility (PKB) : 11.10 2D Compatibility (Sec. Struct. Predict.) : 0.53 1D Compatibility (Hydrophobicity) : 0.61 QMean score : 0.368

(partial model without unconserved sides chains): PDB file : Tito_1YFS.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1YFS-query.scw PDB file : Tito_Scwrl_1YFS.pdb: