Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEARKRMVKRAVQEIKDGMNVNLGIGMPTLVANEIPDGVHVMLQSENGLLGIGPYPLEGTEDADLINAGKETITEVTGASYFDSAESFAMIRGGHIDLAILGGMEVSEQGDLANWMIPGKMVKGMGGAMDLVNGAK-RIVVIMEHVNKHGESKVKKTCSLPLTGQKVVHRLITDLAVFDFVNGR-MTLTELQDGVTIEEVYEKTEADFAVSQSVLNS
1M3E Chain:A ((263-474))----RERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLI--


General information:
TITO was launched using:
RESULT:

Template: 1M3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1074 -55390 -51.57 -263.76
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -51.57
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_1M3E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M3E-query.scw
PDB file : Tito_Scwrl_1M3E.pdb: