Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGADVPRDSQRARVYAAEAFVRTLFDRVTAHGSPTVEFFGTQLTLPPEGRFGSVASVQRYVDDVLALPAVGQNWPTVSPVRVRARRAATAAHYENHGGTGTIAVPDRH---TAGWAMRELVVLHEVAHHLCQVPPPHGPEFVATVCTLTELVMGPEVGHVFRVVYAQEGVR |
| 3CQB Chain:A ((65-98)) | ---------------------------------------------------------------------------------------------------DSLVAVSTGLLHNMTR-DEAEAVLAHEVSHIANGD-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5594 for 127 contacts (-44.0/contact) +
2D Compatibility (PS) -3360 + (NN) -3895 + (LL) 8896
1D Compatibility (HY) 400 + (ID) 400
Total energy: -3953.0 ( -31.13 by residue)
QMean score : 0.058
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