Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTVHSSIDQHPDLLALRASFDRAAESTIAHFTFGLALLAGLYVAASPWIVGFSATRGLPTCDLIVGIAVAYLAYGFASALDRTHGMTWTLPVLGVWVIFSPWVLPGVAVTAGMMWSHIIAGAVVAVLGFYFGMRTRAAANQG
3S1C Chain:A ((353-380))
----------------------------------------------------------------------------YAAFLDRVHGEEVALNKLGLWRVPHPWL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5455 for 103 contacts (-53.0/contact) +
2D Compatibility (PS) -2569 + (NN) 1597 + (LL) 8996
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -431.0 ( -4.18 by residue)
QMean score : -0.143
(partial model without unconserved sides chains):
PDB file :
Tito_3S1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S1C-query.scw
PDB file :
Tito_Scwrl_3S1C.pdb
: