Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREAAQALGFEVLDQRDLVRNLRTHYSRVFEELEARRLELEGKSSQEYLDKMRVGLKNWVEAADNGHSRVGHPTFPRTRLTPICQLPTAAIDSTAGRRRYR
2FK8 Chain:A ((238-316))
-VEHGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEVTSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPGA---------------------
General information:
TITO was launched using:
RESULT:
Template:
2FK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6972 for 446 contacts (-15.6/contact) +
2D Compatibility (PS) -8814 + (NN) -5116 + (LL) 1492
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -21910.0 ( -49.13 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_2FK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FK8-query.scw
PDB file :
Tito_Scwrl_2FK8.pdb
: