Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPL-----------ARTQPALDLDALIGGFKP---LFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK |
| 3LS6 Chain:A ((121-194)) | -------------------------------------------------------------------------------------------------------------AIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTL-AGFKPAGVLCELTNDDGTMARAPECI-AFAGQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3292 for 240 contacts (-13.7/contact) +
2D Compatibility (PS) -6711 + (NN) -4033 + (LL) 19892
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: 1406.0 ( 5.86 by residue)
QMean score : 0.003
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