Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMVKSIAAGLTAAAAIGAAAAGVTSIMAGGPVVYQMQPVVFGAPLPLDPASAPDVPTAAQLTSLLNSLADPNVSFANKGSLVEGGIGGTEARIADHKLKKAAEHGDLPLSFSVTNIQ--PAAAGSATADVSVSGPKLSSPVTQNVTFVNQ-GGWMLSRASAMELLQAAGN |
| 2RCD Chain:A ((72-123)) | -------------------------------------------------------------------------------------------------------------LDRALRNTVITTYGHDMAVASTEFTRTGSTKIGRQMQTWVKMPEGWRIVAAH---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8886 for 241 contacts (-36.9/contact) +
2D Compatibility (PS) -5252 + (NN) -233 + (LL) 7192
1D Compatibility (HY) 0 + (ID) 500
Total energy: -7679.0 ( -31.86 by residue)
QMean score : 0.219
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