Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANPFVKAWKYLMALFSSKIDEHADPKVQIQQAIEEAQRTHQALTQQAAQVIGNQRQLEMRLNRQLADIEKLQVNVRQALTLADQATAAGDAAKATEYNNAAEAFAAQLVTAEQSVEDLKTLHDQALSAAAQAKKAVERNAMVLQQKIAERTKLLSQLEQAKMQEQVSASLRSMSELAAPGNTPSLDEVRDKIERRYA---NAIGSAELAESSVQG----RMLEVEQAG---IQMAGHSRLEQIRAS--MRGEALPAGGTTATPRPATETSGGAIAEQPYGQ |
| 2YQC Chain:A ((43-161)) | ---------------------------------------------------------------------------------------------------------------------------------------------------IEEPAKLISTVEQAIQFSQ----SRNFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKP---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14240 for 425 contacts (33.5/contact) +
2D Compatibility (PS) -10772 + (NN) -3165 + (LL) 15468
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: 9421.0 ( 22.17 by residue)
QMean score : 0.136
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