Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDERTLTLEPIPASGALDLDATTVSAAAPAQ--GYRPAA------NASISRGDAPVLEIPQAISVVPAQALQDQRPRNLDDALGNISGITQANTLGG--TQDAVMKRGFG-DNRDGSIMRDGMPSVQGRNFTATA-------DHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSGLAYRMILDHEDEDYWRDFGKSRETLVAPSLAWYGEDTT--VNLSYEHREFTTPFDRGTAIDPRTNRPLDIPRSRRLDEPFNITEGRSELTR------LDLERQLDDTWKAH---------------FGYGYSRE---TYDDNQARVMAVNADGTLTRRMDGTHGAVSSDSFTTLGLSGTLQ----LAGMQHDLQFGMDHEK-RKIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQT-------------DKLRSDSLYFQDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYMRSFKPNSTIAPLSTGETIDSAIL-PEEATSWELGAKL---DVPGRLSGTLALFDIRKKNVLVNELDGAGNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVARNTASLSAVYEL--GQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVADAFASYD-TRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF |
| 1QFF Chain:A ((19-725)) | -------------------------------------------------------------------------------------------------------------------------------ESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVS-VGTRGASNTYDHLIIRGFAAEGQSQNNYLNGL-KLQG-NFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDD---DGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY-YGWLPKEGTVEPL--PNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKY-----VVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPSSHHHHHHGSSVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGG-RYDWADQES-LNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGK-------DGNIFAPSKGKQYEVGVKYVPEDRPIVVTG--AVYNLTKTNNLMADPEGSFFSV--EGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSG---LTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 126009 for 5378 contacts (23.4/contact) +
2D Compatibility (PS) -65898 + (NN) -11801 + (LL) 10600
1D Compatibility (HY) -31600 + (ID) 9800
Total energy: 17510.0 ( 3.26 by residue)
QMean score : 0.169
|
|
|