Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF |
| 3VY8 Chain:X ((322-355)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRTSALVSAGWLKQGKGAGK---VEQTASMVGLRHKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3006 for 130 contacts (23.1/contact) +
2D Compatibility (PS) -3580 + (NN) -1227 + (LL) 12092
1D Compatibility (HY) 400 + (ID) 150
Total energy: 10541.0 ( 81.08 by residue)
QMean score : 0.041
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