Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALISMRQMLDHAAEFGYGVPAFNVNNLEQMRAIMEAADKTDSPVIVQASAGARKYAGAPFLRHLILAAIEEFPH-----IPVVMHQDHGTSPDVCQRSIQLGFSSVMMDGSLREDGKTPADYDYNVRVTQQTVAFAHACGVSVEGELGCLGSLETGMAGEEDGVGAEGVLDHSQLLTDPEEAADFVKKTKVDALAIAIGTSHGAYKFTKPPTGDTLSIQRIKEI--HARIPDTHLVMHGSSSVPQDWLAIINEYGGEIKETYGVPVEEIVEGIKYGVRKVNIDTDLRLASTGAIRRFLAQNPSEFDPRKYFSKTVEAMRDICIARYEAFGTAGNASKIKPISLEGMFQRYARGELDPKVN |
4TO8 Chain:A ((2-285)) | -PLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFY---TIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDAS-----HSP--FEENVATTKKVVEYAHEKGVSVEAELGTVG-------G--DDVVADGI-----IYADPKECQELVEKTGIDALAPALGSVHG------P----KLGFKEMEEIGLSTGLP---LVLHGGT---------------------GIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRAKH----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139518 for 2375 contacts (-58.7/contact) +
2D Compatibility (PS) -29997 + (NN) -13052 + (LL) 4532
1D Compatibility (HY) -21600 + (ID) 5700
Total energy: -205335.0 ( -86.46 by residue)
QMean score : 0.588
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