Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGRLRGTLAEKQPPHLILDVNGVGYEVEVPMTTLYRLPSVGEPVTLHTHLVVREDAHLLYGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERLLVELKDRFKAWENMPTIAPLVMEPRASATVSSAEADAVSALIALGFKPQEASRAVAAVPGEDLSSEEMIRQALKGMV
1IXR Chain:A ((1-135))
MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQALEE-GKEVGVHTHLLLKEEGLSLYGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGK---------VPPHL--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101330 for 1038 contacts (-97.6/contact) +
2D Compatibility (PS) -14994 + (NN) -10246 + (LL) 5448
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -134922.0 ( -129.98 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1IXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXR-query.scw
PDB file :
Tito_Scwrl_1IXR.pdb
: