Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSHAFARWNLLLLVASIFAGLVFAPSVDLSALPTPEA-----------RKWVLAEVPSVAVDTTVAGKLAGMSWWGRTVDEEREAESKRVSVGVDGVALIKVDWLLRGIVRDEGGIFALVAKSAEGPLRRFAAGATLPGGERLESITEQGIRFSFSQDGNTQGFERKLYAPLP |
1GZ7 Chain:A ((295-364)) | --------------------GVLAYPSLRLSYLPRPDGTFITDDMYALVRDGKYAHVPVIIGDQNDEGTLFGLSSLNVTTDAQARAYFKQSFIHASDAEIDTLMAAYTSDITQGSPFDTGIFNAITPQFKRISALLGDLAFTLARRYFLNYYQGGTKYSFLSKQLSGLPVLGTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 984 for 230 contacts (4.3/contact) +
2D Compatibility (PS) -6221 + (NN) -1112 + (LL) 2364
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -6635.0 ( -28.85 by residue)
QMean score : 0.087
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