Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSDVIKGKWKQLTGKIKERWGDLTDDDLQAADGHAEYLVGKLQERYGWSKERAEQEVRDFSDRL
1HE1 Chain:A ((89-132))
--------QWGTTGGAASQLVLDASPELRREITDQLHQVMSEVALLRQAVES-------------
General information:
TITO was launched using:
RESULT:
Template:
1HE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5049 for 189 contacts (26.7/contact) +
2D Compatibility (PS) -4654 + (NN) -1441 + (LL) 1404
1D Compatibility (HY) 800 + (ID) 150
Total energy: 1008.0 ( 5.33 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1HE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HE1-query.scw
PDB file :
Tito_Scwrl_1HE1.pdb
: