Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRYIAFANSPVGRRLVGAVGLPSPLRLERWQAGRVRPVDGPLVIGGSGALAEAVLPFAGKLTDAVFAAVDGQFELPRWTAEHSPRAKAVLFDASGLTRFEQLVALRDFFQPVLKGLDKCPKVVVLGRPPESLKDPVTASVQRSLEGFTRSLGKEIRRGGNVQLLYVGKGAEDQLEGALRFFLSPKSAYVSGQVIRLAANSAQVHDWSKPLAGQRALVTGAARGIGAAIAETLARDGAEVVLLDVPPAREALEGLAARLG--GRAVALDICAADAGQQLVEALPE---GVDIVVHNAGITRDKTLAKMSSDFWNSVINVNLNAPQVLTQALLDGGKLHDNGRVVLLASISGIAGNLGQSNYAVSKAGLIGLAQAWAPALGKRGITINAVAPGFIETQMTAAIPLTIREAGRRMNSMSQGGLPQDVAETVAWFAQPSSGAVSGQVLRVCGQSLLGA |
| 3RRO Chain:A ((10-246)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEGKVALVTGASRGIGKAIAELLAERGAKVI--GTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140384 for 1977 contacts (-71.0/contact) +
2D Compatibility (PS) -24788 + (NN) -1800 + (LL) 13836
1D Compatibility (HY) -14400 + (ID) 4650
Total energy: -172186.0 ( -87.09 by residue)
QMean score : 0.548
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