Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNLILTAMLAMASLFGMAAQADDYTAGKEYVELSSPVPVSQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALF--GGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERAAAKK
2IJY Chain:A ((3-178))
------------------------FKEGEHYQVLKTPASSSPV----VSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVRRFDKQFQDSGLTGVPAVVVNNRYLVQGQSAKSLDEYFDLVNYLL---------
General information:
TITO was launched using:
RESULT:
Template:
2IJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118997 for 1365 contacts (-87.2/contact) +
2D Compatibility (PS) -18853 + (NN) -6013 + (LL) 3708
1D Compatibility (HY) -9600 + (ID) 2600
Total energy: -152355.0 ( -111.62 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_2IJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IJY-query.scw
PDB file :
Tito_Scwrl_2IJY.pdb
: