Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLLGLLQSGGSVLGQAMEQVTGGNLLSTLLIACAFTLSLVYLFRLAVGHMVQLPAGAKSPPYIYSPIPFLGHAIAFGKSPIEFLENAYE--KYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEEVYGRLTTPVFGKGVAYDVPNAVFLEQKKILKSGLNIAHFKQYVSIIEKEAKEYF-KSWGES-GERNVFEALSELIILTASHCLHGKEIRSQLNEK-VAQLYADLDGGFSHAAWLLPGWL-PLPSFRRRDRAHREIKNIFYKAI---QKRRLSKEP-AEDILQTLLDSTYKDGRPLTDDEIAGMLIGLLLAGQHTSSTTSAWMGFFLARDKPLQDKCYLEQKTVCGEDLPP-LTYEQLKD-LNLLDRCIKETLRLRPPIMTMMRMAKTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLINGYFPSVNYTTMIHTP--ENPVIRYKRRSK |
| 3KSW Chain:A ((1-448)) | ----------------------------------------------------------KTPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYT-IMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMP---LPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPK---NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDG---AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPDYHTMVVGPTLNQCLVKYTRKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184000 for 3134 contacts (-58.7/contact) +
2D Compatibility (PS) -45858 + (NN) -21599 + (LL) 5924
1D Compatibility (HY) -37600 + (ID) 7600
Total energy: -290733.0 ( -92.77 by residue)
QMean score : 0.393
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