Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNS--DRSIPMTVD-FIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA
3OZG Chain:A ((36-247))
--------VFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVS-EDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKA
General information:
TITO was launched using:
RESULT:
Template:
3OZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164987 for 1647 contacts (-100.2/contact) +
2D Compatibility (PS) -23206 + (NN) -11763 + (LL) 184
1D Compatibility (HY) -26000 + (ID) 5250
Total energy: -231022.0 ( -140.27 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_3OZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZG-query.scw
PDB file :
Tito_Scwrl_3OZG.pdb
: