Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
4LAG Chain:X ((2-158))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
4LAG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124255 for 1173 contacts (-105.9/contact) +
2D Compatibility (PS) -16434 + (NN) -4014 + (LL) 272
1D Compatibility (HY) -24000 + (ID) 7850
Total energy: -176281.0 ( -150.28 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_4LAG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LAG-query.scw
PDB file :
Tito_Scwrl_4LAG.pdb
: