Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNL-PSDMH--IQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
| 3ML5 Chain:A ((12-267)) | -------------------------------WGYGQDDGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLEL---SYEACMSLSITNNGHSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDV-GSEHTVDGKSFPSELHLVHWNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKSLLPA-SRHYWTYPGSLTTPPLSESVTWIVLREPISISERQMGKFRSLLFTS--EDDERIHMVNNFRPPQPLKGRVVKASF----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ML5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126935 for 2012 contacts (-63.1/contact) +
2D Compatibility (PS) -27006 + (NN) -16809 + (LL) 8232
1D Compatibility (HY) -18800 + (ID) 5150
Total energy: -186468.0 ( -92.68 by residue)
QMean score : 0.416
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