Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYD--KKQTWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSD--LPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLY---YDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
4KP8 Chain:A ((21-260)) | --------------------------------------------SCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQG--LQSRYSATQLHLHWGNPNDPH-GSEHTVSGQHFAAELHIVHYNSD-LYPDASTASNKSEGLAVLAVLIEMGS-FNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLP--ERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTS---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98704 for 1845 contacts (-53.5/contact) +
2D Compatibility (PS) -24779 + (NN) -5331 + (LL) 4720
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -148894.0 ( -80.70 by residue)
QMean score : 0.329
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