Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAAEEEPKPKKLKVEAPQALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWM-LVEKARVCYIAGFFLTVSPESVLKVAHHASE-NNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQAL-PKMNSKRQRIVIFTQGRDDTIMATESE-----VTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH |
| 1LII Chain:A ((15-353)) | -------------------------VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSAG-YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGTCAVLINEKERTLCTHLGACGSFR------IPENWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAKVALSVANKEHAVE-----GATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYGLSQGKTVKQCIMCGNACAQDVIQHVG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200768 for 2813 contacts (-71.4/contact) +
2D Compatibility (PS) -33186 + (NN) -6559 + (LL) 3044
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -266669.0 ( -94.80 by residue)
QMean score : 0.587
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